Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
1
DNase-seq
1
RNA microarray
1
pCHi-C
Assay category
Transcription
5
DNA accessibility
Date released
August, 2017
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
November, 2019
1
October, 2019
Available data
27
bam
fastq
10
bed narrowPeak
10
bigWig
8
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bedpe bed3+
1
tsv
Organism
6
Homo sapiens
Biosample type
7
tissue
Organ
227
pancreas
224
kidney
213
brain
208
epithelium
206
heart
113
vasculature
112
liver
110
blood vessel
108
limb
97
bone element
78
artery
54
musculature of body
52
connective tissue
42
eye
38
nerve
22
vein
18
ureter
12
skeleton
11
lung
9
blood
9
bodily fluid
7
adipose tissue
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Project
7
AMP
Genome assembly (visualization)
5
hg19
2
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
May, 2019
August, 2017
files.file_type!
fastq
assay_slims!
Transcription
BIOSAMPLE
ASSAY
7 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
RNA microarray
pCHi-C
tissue
adipose tissue
3
1
adipose tissue(adipose white tissue)
1
omental fat pad
1
subcutaneous adipose tissue
1
Download