Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
29
ChIP-seq
4
DNase-seq
Assay category
56
Transcription
49
DNA accessibility
29
DNA binding
Target of assay
18
histone
18
histone modification
14
broad histone mark
7
control
4
narrow histone mark
4
transcription factor
Date released
66
February, 2021
35
February, 2023
26
October, 2019
May, 2019
3
July, 2019
August, 2021
2
February, 2020
2
June, 2019
Available data
97
bam
82
bigWig
71
bed narrowPeak
56
tsv
22
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
134
Homo sapiens
Biosample type
66
cell line
66
tissue
2
primary cell
Organ
578
connective tissue
469
pancreas
446
adipose tissue
291
liver
280
heart
256
epithelium
237
brain
219
kidney
174
vasculature
171
blood vessel
159
bone element
134
artery
115
limb
87
musculature of body
61
eye
43
nerve
22
vein
20
lung
18
ureter
16
skeleton
9
blood
9
bodily fluid
5
gonad
5
ovary
2
embryo
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
134
AMP
Genome assembly (visualization)
125
GRCh38
90
hg19
Lab
134
AMP-T2D consortium
month_released!
May, 2019
August, 2021
files.file_type!
fastq
BIOSAMPLE
ASSAY
134 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
coronary artery
1
36
2
tibial artery
1
1
23
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download