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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
Assay category
92
DNA binding
Target of assay
58
histone
58
histone modification
40
narrow histone mark
30
control
18
broad histone mark
4
transcription factor
Date released
50
May, 2020
20
August, 2017
12
November, 2017
6
February, 2021
4
August, 2021
Available data
871
bam
831
bigWig
617
bed narrowPeak
465
fastq
437
bigBed narrowPeak
342
tsv
93
bed broadPeak
93
bigBed broadPeak
92
tagAlign
43
bed bed3+
11
bed bedMethyl
11
bigBed bedMethyl
5
bedpe bed3+
5
hic
3
tar
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
92
Homo sapiens
Biosample type
70
tissue
18
cell line
4
primary cell
Organ
118
brain
86
liver
22
connective tissue
19
pancreas
15
musculature of body
8
adipose tissue
7
epithelium
6
artery
6
blood vessel
6
heart
6
vasculature
1
pituitary gland
Project
92
AMP
Genome assembly (visualization)
46
hg19
35
GRCh38
Lab
92
AMP-T2D consortium
Audit category:
11
inconsistent control read length
month_released!
May, 2019
BIOSAMPLE
ASSAY
92 results
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ChIP-seq
tissue
liver
70
cell line
HepG2
12
smooth muscle cell of the coronary artery
6
primary cell
hepatocyte
4
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