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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
29
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
DNA accessibility
29
DNA binding
Target of assay
18
histone
18
histone modification
14
broad histone mark
7
control
4
narrow histone mark
4
transcription factor
Date released
58
February, 2021
23
October, 2019
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
Available data
83
bam
76
bigWig
58
tsv
22
bed narrowPeak
18
bigBed narrowPeak
6
tagAlign
Organism
87
Homo sapiens
Biosample type
58
cell line
27
tissue
2
primary cell
Organ
771
pancreas
762
liver
650
connective tissue
483
adipose tissue
396
epithelium
295
heart
221
brain
186
kidney
147
bone element
128
vasculature
124
blood vessel
87
artery
71
limb
60
blood
60
bodily fluid
54
musculature of body
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
87
AMP
Genome assembly (visualization)
76
GRCh38
76
hg19
Lab
87
AMP-T2D consortium
month_released!
May, 2019
organ_slims!
ovary
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
87 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
1
23
pulmonary artery
2
coronary artery
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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