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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
22
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
22
DNA binding
14
DNA accessibility
Target of assay
18
histone
18
histone modification
14
broad histone mark
4
narrow histone mark
4
transcription factor
Date released
64
February, 2021
21
October, 2019
3
July, 2019
May, 2019
2
June, 2019
Available data
90
bam
82
bigWig
54
tsv
36
bed narrowPeak
22
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
90
Homo sapiens
Biosample type
64
cell line
24
tissue
2
primary cell
Organ
657
pancreas
625
liver
589
connective tissue
426
adipose tissue
307
epithelium
173
heart
139
brain
126
vasculature
125
kidney
120
blood vessel
90
artery
90
limb
70
bone element
67
musculature of body
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
90
AMP
Genome assembly (visualization)
125
GRCh38
90
hg19
Lab
90
AMP-T2D consortium
month_released!
May, 2019
BIOSAMPLE
ASSAY
90 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
4
8
tissue
tibial artery
18
1
2
coronary artery
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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