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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
3
MeRIP-seq
Assay category
26
DNA binding
Target of assay
90
histone
90
histone modification
48
narrow histone mark
42
broad histone mark
29
control
8
transcription factor
7
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
12
August, 2017
3
December, 2017
3
November, 2020
3
October, 2019
2
June, 2019
2
November, 2017
2
November, 2019
1
August, 2021
May, 2019
1
May, 2021
Available data
26
bam
17
fastq
2
bigWig
2
tagAlign
Organism
29
Homo sapiens
Biosample type
20
primary cell
5
cell line
4
in vitro differentiated cells
Organ
108
liver
52
pancreas
35
connective tissue
29
epithelium
28
brain
24
adipose tissue
16
limb
14
heart
11
kidney
11
nerve
11
vasculature
10
blood vessel
8
spleen
7
artery
7
embryo
6
blood
6
bodily fluid
5
musculature of body
2
vein
1
eye
Project
29
AMP
Genome assembly (visualization)
2
hg19
Lab
26
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
8
inconsistent ontology term
month_released!
May, 2019
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
brain microvascular endothelial cell
1
+ See 3 more…
cell line
EndoC_BH1
2
3
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
See all biosamples
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