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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
227
ChIP-seq
Assay category
227
DNA binding
Target of assay
504
histone modification
503
histone
276
narrow histone mark
227
broad histone mark
165
control
85
transcription factor
19
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
73
August, 2017
May, 2019
42
November, 2017
39
October, 2019
37
April, 2019
19
October, 2018
10
October, 2017
4
January, 2019
3
December, 2017
Available data
177
bed narrowPeak
177
bigWig
166
bam
148
bigBed narrowPeak
76
tagAlign
45
fastq
20
bed broadPeak
6
bed bed3+
Organism
223
Homo sapiens
Biosample type
227
tissue
120
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
55
brain
41
pancreas
30
heart
30
limb
25
liver
20
adipose tissue
20
connective tissue
16
nerve
14
artery
14
blood vessel
14
vasculature
12
musculature of body
10
kidney
4
spleen
Project
227
AMP
Genome assembly (visualization)
166
GRCh38
142
hg19
Lab
227
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
month_released!
May, 2019
BIOSAMPLE
ASSAY
227 results
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ChIP-seq
tissue
liver
22
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
islet of Langerhans
14
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