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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
104
ATAC-seq
26
Hi-C
19
RRBS
5
FAIRE-seq
4
pCHi-C
2
Capture-C
2
DNase-seq
2
total RNA-seq
1
snATAC-seq
Assay category
104
DNA accessibility
Date released
45
February, 2023
May, 2020
38
May, 2022
5
May, 2021
4
February, 2021
4
March, 2020
3
January, 2018
3
October, 2019
2
August, 2021
Available data
70
bed narrowPeak
40
bigWig
18
bam
18
fastq
10
bed bed3
7
bed bedgraph
4
bed bed3+
3
bigBed narrowPeak
3
txt
2
tsv
Organism
104
Homo sapiens
Biosample type
76
tissue
25
in vitro differentiated cells
3
cell line
Organ
27
eye
22
pancreas
20
connective tissue
20
liver
14
epithelium
4
bone element
4
skeleton
3
adipose tissue
1
blood
1
bodily fluid
1
brain
1
musculature of body
Project
104
AMP
Genome assembly (visualization)
GRCh38
216
hg19
Lab
56
AMP-T2D consortium
23
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
5
Struan F.A. Grant, CHOP
Audit category:
5
inconsistent ontology term
month_released!
May, 2020
assembly!
GRCh38
BIOSAMPLE
ASSAY
104 results
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Clear Filters
ATAC-seq
tissue
islet of Langerhans
20
liver
20
retina
15
pigmented layer of retina
12
adipose tissue
3
+ See 6 more…
in vitro differentiated cells
adipocyte
8
embryonic stem cell
6
chondrocyte
5
immature adipocyte
2
Progenitor cell of Hypothalamus (neural progenitor cell)
1
+ See 3 more…
cell line
EndoC_BH1
2
GM12878
1
See all biosamples
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