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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
total RNA-seq
Assay category
48
DNA binding
44
DNA accessibility
4
Transcription
Target of assay
48
histone
48
histone modification
34
broad histone mark
14
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
February, 2021
6
May, 2019
Available data
96
bam
92
bed narrowPeak
90
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
Organism
96
Homo sapiens
Biosample type
96
tissue
Organ
605
pancreas
588
connective tissue
455
liver
425
adipose tissue
297
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
96
AMP
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
96
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
May, 2020
November, 2019
BIOSAMPLE
ASSAY
96 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
24
2
1
4
tibial artery
18
2
1
muscle of leg
6
13
muscle of arm
17
distal epiphysis of femur
1
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