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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
Assay category
25
DNA binding
Target of assay
histone
50
histone modification
26
narrow histone mark
25
transcription factor
24
broad histone mark
6
chromatin remodeller
2
RNA binding protein
1
recombinant protein
Date released
13
August, 2017
9
November, 2017
3
November, 2018
Available data
35
bam
35
fastq
34
bigWig
11
bed narrowPeak
11
bigBed narrowPeak
bed bed3+
Organism
25
Homo sapiens
Biosample type
12
cell line
8
tissue
5
in vitro differentiated cells
Organ
13
connective tissue
12
liver
8
adipose tissue
Project
25
AMP
Genome assembly (visualization)
24
hg19
17
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
25
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
month_released!
May, 2020
files.file_type!
bed bed3+
target.investigated_as!
histone
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
cell line
HepG2
12
tissue
white adipose tissue
8
in vitro differentiated cells
adipocyte
5
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