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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
4
DNase-seq
1
FAIRE-seq
Assay category
69
DNA binding
5
DNA accessibility
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
39
May, 2019
33
October, 2019
June, 2019
2
November, 2017
Available data
175
bam
145
bigWig
124
bed narrowPeak
74
bigBed narrowPeak
68
tsv
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
74
Homo sapiens
Biosample type
59
tissue
15
primary cell
Organ
356
liver
97
brain
87
pancreas
76
vasculature
74
blood vessel
61
heart
58
epithelium
54
blood
54
bodily fluid
52
limb
26
nerve
24
kidney
23
artery
13
connective tissue
13
spleen
13
vein
9
adipose tissue
6
musculature of body
Project
74
AMP
Genome assembly (visualization)
74
hg19
73
GRCh38
Lab
74
AMP-T2D consortium
month_released!
May, 2020
June, 2019
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
thoracic aorta
12
aorta
11
coronary artery
3
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
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