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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
30
DNase-seq
1
FAIRE-seq
Assay category
82
DNA binding
31
DNA accessibility
Target of assay
82
histone
82
histone modification
53
broad histone mark
29
narrow histone mark
Date released
57
November, 2017
30
June, 2019
25
May, 2019
1
July, 2019
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
113
Homo sapiens
Biosample type
108
tissue
5
primary cell
Organ
113
brain
104
kidney
94
heart
84
limb
79
vasculature
77
blood vessel
47
musculature of body
36
epithelium
26
nerve
26
pancreas
25
artery
19
connective tissue
18
ureter
13
vein
6
eye
2
adipose tissue
2
liver
Project
113
AMP
Genome assembly (visualization)
112
GRCh38
51
hg19
Lab
113
AMP-T2D consortium
month_released!
May, 2020
files.file_type!
fastq
BIOSAMPLE
ASSAY
113 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
layer of hippocampus
16
caudate nucleus
12
1
temporal lobe
13
angular gyrus
12
brain
12
+ See 14 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
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