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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
Assay category
55
DNA binding
Target of assay
333
transcription factor
81
recombinant protein
56
RNA binding protein
56
histone modification
55
histone
30
broad histone mark
25
narrow histone mark
23
chromatin remodeller
13
control
2
other context
2
other post-translational modification
Date released
May, 2020
17
December, 2017
15
November, 2017
12
August, 2017
6
August, 2021
5
October, 2019
Available data
55
bigWig
53
bed narrowPeak
52
bam
44
fastq
35
bigBed narrowPeak
31
tagAlign
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
55
Homo sapiens
Biosample type
22
tissue
18
cell line
12
in vitro differentiated cells
3
primary cell
Organ
166
brain
142
pancreas
97
heart
90
epithelium
68
vasculature
67
blood vessel
55
liver
48
limb
35
connective tissue
30
kidney
27
musculature of body
24
nerve
20
artery
12
vein
11
embryo
6
spleen
2
adipose tissue
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
55
AMP
Genome assembly (visualization)
55
hg19
50
GRCh38
Lab
52
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
month_released!
May, 2020
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ChIP-seq
tissue
liver
17
right lobe of liver
5
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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