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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
7
WGBS
5
RRBS
1
DNase-seq
Assay category
115
DNA binding
12
DNA methylation
1
DNA accessibility
Target of assay
96
histone
96
histone modification
60
broad histone mark
36
narrow histone mark
19
control
Date released
270
August, 2021
128
August, 2017
117
February, 2023
98
February, 2021
65
May, 2021
61
October, 2019
47
March, 2020
47
September, 2023
42
May, 2022
40
May, 2024
25
February, 2020
19
April, 2020
15
May, 2023
14
November, 2017
13
July, 2019
10
November, 2020
8
January, 2018
8
January, 2021
8
October, 2017
5
December, 2019
4
July, 2018
4
March, 2019
4
March, 2023
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
May, 2020
1
October, 2022
Available data
229
fastq
226
bigWig
bam
109
bed narrowPeak
89
tsv
73
tagAlign
33
bed bed3+
27
bed broadPeak
23
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
1
bigBed broadPeak
Organism
128
Homo sapiens
Biosample type
114
tissue
14
in vitro differentiated cells
primary cell
Organ
54
connective tissue
40
adipose tissue
28
liver
26
musculature of body
20
pancreas
Project
128
AMP
Genome assembly (visualization)
23
hg19
Lab
128
AMP-T2D consortium
month_released!
May, 2020
May, 2019
biosample_type!
primary cell
files.file_type!
bam
BIOSAMPLE
ASSAY
128 results
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ChIP-seq
WGBS
RRBS
DNase-seq
tissue
subcutaneous abdominal adipose tissue
36
3
liver
23
3
1
skeletal muscle tissue
22
4
islet of Langerhans
20
adipose tissue
1
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in vitro differentiated cells
adipocyte
14
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