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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
Hi-C
Assay category
1755
DNA binding
1721
Transcription
688
DNA accessibility
96
DNA methylation
7
3D chromatin structure
1
DNA sequencing
Date released
4
July, 2019
1
August, 2021
1
December, 2018
1
October, 2019
Available data
hic
20
bedpe bed3+
5
bed bed3+
5
bigWig
5
hdf5
3
cool
1
bedpe
1
fastq
Organism
7
Homo sapiens
Biosample type
4
primary cell
2
cell line
1
tissue
Organ
limb
4
musculature of body
3
brain
2
blood vessel
2
epithelium
2
liver
2
pancreas
2
vasculature
1
connective tissue
Project
7
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent assembly
month_released!
May, 2020
organ_slims!
limb
files.file_type!
hic
BIOSAMPLE
ASSAY
7 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
HepG2
1
Panc1
1
tissue
islet of Langerhans
1
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