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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
2
Hi-C
1
FAIRE-seq
1
pCHi-C
Assay category
7
DNA binding
2
3D chromatin structure
1
DNA accessibility
Target of assay
5
histone
5
histone modification
4
broad histone mark
2
control
1
narrow histone mark
Date released
9
October, 2019
2
March, 2020
May, 2021
Available data
8
bam
3
bigWig
2
bed broadPeak
2
bigBed broadPeak
2
hic
1
bed narrowPeak
1
bedpe bed3+
1
bigBed narrowPeak
1
tar
1
tsv
Organism
11
Homo sapiens
Biosample type
10
primary cell
1
tissue
Organ
293
pancreas
260
liver
213
epithelium
149
kidney
127
heart
117
connective tissue
92
bone element
69
brain
67
adipose tissue
55
eye
45
vasculature
43
blood vessel
43
musculature of body
26
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
17
hg19
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
May, 2021
assembly!
GRCh38
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
Hi-C
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein
7
2
1
tissue
thymus
1
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