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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
3
ChIP-seq
2
HiChIP
Assay category
54
Transcription
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
May, 2021
45
May, 2020
10
February, 2023
7
March, 2020
Available data
50
bam
50
bigWig
47
tsv
3
bed narrowPeak
Organism
62
Homo sapiens
Biosample type
45
primary cell
9
tissue
8
cell line
Organ
12
pancreas
3
epithelium
Project
3344
AMP
227
HPAP
62
T1D
47
KPMP
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
50
GRCh38
50
hg19
Lab
55
Kyle Gaulton, UCSD
7
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
month_released!
May, 2021
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
62 results
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total RNA-seq
CRISPR genome editing followed by DNA sequencing
ChIP-seq
HiChIP
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
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tissue
islet of Langerhans
7
2
cell line
EndoC_BH1
2
3
1
2
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