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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
total RNA-seq
10
ATAC-seq
3
ChIP-seq
Assay category
47
Transcription
10
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
May, 2021
45
May, 2020
7
August, 2020
5
March, 2020
3
September, 2020
Available data
169
fastq
153
zippedFastqFolder
60
bigWig
53
tsv
50
bam
3
bed narrowPeak
Organism
60
Homo sapiens
Biosample type
55
primary cell
3
cell line
2
tissue
Organ
15
pancreas
13
epithelium
Project
AMP
50
T1D
10
HPAP
Genome assembly (visualization)
60
GRCh38
50
hg19
Lab
45
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
5
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
month_released!
May, 2021
assay_title!
Hi-C
award.project!
AMP
BIOSAMPLE
ASSAY
60 results
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total RNA-seq
ATAC-seq
ChIP-seq
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
+ See 22 more…
cell line
EndoC_BH1
2
1
tissue
islet of Langerhans
2
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