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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
Assay category
96
DNA binding
Target of assay
637
histone modification
636
histone
482
transcription factor
326
narrow histone mark
309
broad histone mark
96
RNA binding protein
88
recombinant protein
35
chromatin remodeller
13
control
5
other context
5
other post-translational modification
Date released
32
November, 2017
21
November, 2018
11
October, 2018
6
August, 2017
6
January, 2019
5
May, 2024
4
December, 2017
4
May, 2019
3
April, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
96
bigWig
95
bed narrowPeak
93
bam
84
fastq
83
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
tar
Organism
96
Homo sapiens
Biosample type
63
cell line
27
tissue
primary cell
6
in vitro differentiated cells
Organ
56
liver
10
blood
10
bodily fluid
10
heart
9
connective tissue
9
pancreas
5
adipose tissue
3
blood vessel
3
epithelium
3
vasculature
1
artery
Project
96
AMP
Genome assembly (visualization)
91
GRCh38
90
hg19
Lab
90
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
month_released!
May, 2021
biosample_type!
primary cell
BIOSAMPLE
ASSAY
96 results
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ChIP-seq
cell line
HepG2
52
GM12878
10
EndoC_BH1
1
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
omental fat pad
3
islet of Langerhans
2
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in vitro differentiated cells
adipocyte
4
hepatocyte
2
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