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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
119
ChIP-seq
Assay category
119
DNA binding
Target of assay
65
control
54
histone
54
histone modification
33
broad histone mark
21
narrow histone mark
Date released
47
August, 2017
23
May, 2020
21
November, 2017
9
October, 2019
8
August, 2021
8
October, 2017
3
February, 2021
May, 2021
Available data
3115
bam
bigWig
1644
bed narrowPeak
1427
tsv
1358
fastq
1042
bigBed narrowPeak
322
bed broadPeak
308
tagAlign
285
bigBed broadPeak
271
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
118
Homo sapiens
Biosample type
94
tissue
21
in vitro differentiated cells
3
cell line
1
primary cell
Organ
44
liver
36
brain
21
connective tissue
7
adipose tissue
4
pancreas
2
artery
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
epithelium
Project
119
AMP
Genome assembly (visualization)
1
GRCh38
Lab
119
AMP-T2D consortium
Audit category:
1
missing controlled_by
month_released!
May, 2021
files.file_type!
bigWig
BIOSAMPLE
ASSAY
119 results
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ChIP-seq
tissue
liver
43
brain
8
cingulate gyrus
8
subcutaneous abdominal adipose tissue
7
layer of hippocampus
4
+ See 15 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
primary cell
hepatocyte
1
See all biosamples
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