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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
223
ChIP-seq
Assay category
223
DNA binding
Target of assay
162
histone
162
histone modification
104
narrow histone mark
58
broad histone mark
56
control
5
transcription factor
Date released
May, 2021
August, 2017
78
November, 2017
50
May, 2020
49
October, 2019
24
August, 2021
14
October, 2017
8
February, 2021
Available data
2833
bam
2554
bigWig
1502
bed narrowPeak
1338
tsv
1071
fastq
1000
bigBed narrowPeak
281
bed broadPeak
270
bigBed broadPeak
238
bed bed3+
223
tagAlign
161
txt
153
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
223
Homo sapiens
Biosample type
179
tissue
20
cell line
20
in vitro differentiated cells
4
primary cell
Organ
118
brain
66
liver
6
artery
6
blood vessel
6
heart
6
vasculature
4
epithelium
1
pituitary gland
Project
223
AMP
Genome assembly (visualization)
140
GRCh38
111
hg19
Lab
223
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
11
inconsistent control read length
month_released!
May, 2021
August, 2017
BIOSAMPLE
ASSAY
223 results
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Clear Filters
ChIP-seq
tissue
liver
50
substantia nigra
16
caudate nucleus
15
layer of hippocampus
15
brain
14
+ See 39 more…
cell line
HepG2
12
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
in vitro differentiated cells
neural progenitor cell
20
primary cell
hepatocyte
4
See all biosamples
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