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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
234
total RNA-seq
106
ATAC-seq
50
ChIP-seq
18
small RNA-seq
15
RRBS
12
WGBS
8
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
1
pCHi-C
Assay category
234
Transcription
Date released
545
February, 2021
190
May, 2020
May, 2021
120
July, 2018
93
February, 2023
89
August, 2017
74
August, 2021
44
July, 2019
30
October, 2019
26
May, 2022
26
September, 2018
25
February, 2020
20
November, 2019
16
September, 2020
15
February, 2018
15
March, 2020
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
May, 2023
Available data
232
bam
232
bigWig
232
tsv
Organism
234
Homo sapiens
Biosample type
174
tissue
60
primary cell
Organ
147
liver
13
connective tissue
10
heart
9
adipose tissue
5
blood vessel
5
epithelium
5
kidney
5
vasculature
4
brain
2
artery
2
musculature of body
2
pancreas
1
pericardium
Project
189
AMP
45
T1D
Genome assembly (visualization)
232
GRCh38
232
hg19
Lab
189
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
month_released!
May, 2021
BIOSAMPLE
ASSAY
234 results
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Clear Filters
total RNA-seq
tissue
liver
145
omental fat pad
4
subcutaneous adipose tissue
4
body of pancreas
2
heart
2
+ See 13 more…
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 35 more…
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