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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
total RNA-seq
15
RRBS
15
small RNA-seq
12
WGBS
8
Hi-C
6
ATAC-seq
single cell RNA-seq
2
FAIRE-seq
Assay category
50
Transcription
27
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Date released
406
November, 2017
May, 2021
354
August, 2017
341
May, 2020
313
October, 2019
311
February, 2021
217
June, 2019
212
August, 2021
203
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
94
December, 2017
93
July, 2019
86
November, 2018
80
April, 2019
72
September, 2018
63
March, 2020
60
November, 2019
53
October, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
7
August, 2020
7
December, 2019
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2022
Available data
70
bigWig
67
bam
50
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
93
Homo sapiens
Biosample type
67
tissue
26
primary cell
Organ
25
heart
18
connective tissue
15
brain
13
epithelium
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
93
AMP
Genome assembly (visualization)
76
hg19
64
GRCh38
Lab
93
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
May, 2021
organ_slims!
adipose tissue
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
93 results
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total RNA-seq
RRBS
small RNA-seq
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
2
1
4
2
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
+ See 24 more…
primary cell
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
skeletal muscle satellite cell
1
1
astrocyte of the cerebellum
1
+ See 17 more…
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