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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
single cell RNA-seq
16
total RNA-seq
9
ChIP-seq
7
WGBS
3
ATAC-seq
Assay category
57
Transcription
9
DNA binding
7
DNA methylation
3
DNA accessibility
Target of assay
6
control
3
recombinant protein
3
transcription factor
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
40
May, 2024
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
58
fastq
19
zippedFastqFolder
16
bam
12
bigWig
7
bed bedMethyl
7
bigBed bedMethyl
2
bed narrowPeak
2
bigBed narrowPeak
1
csv
Organism
76
Homo sapiens
Biosample type
60
primary cell
9
tissue
7
cell line
Organ
23
pancreas
19
epithelium
5
spleen
4
liver
3
blood
3
bodily fluid
Project
59
HPAP
17
AMP
Genome assembly (visualization)
82
GRCh38
hg19
Lab
59
Klaus Kaestner, Upenn
17
AMP-T2D consortium
Audit category:
1
missing controlled_by
month_released!
May, 2021
assembly!
hg19
BIOSAMPLE
ASSAY
76 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ChIP-seq
WGBS
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
pancreatic cell
1
tissue
spleen
3
2
body of pancreas
2
pancreas
2
cell line
HepG2
3
1
GM12878
3
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