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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
1
ATAC-seq
Assay category
61
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
2
histone
2
histone modification
2
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
1
January, 2018
1
October, 2019
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
Organism
62
Homo sapiens
Biosample type
61
cell line
1
tissue
Organ
720
liver
678
connective tissue
665
pancreas
491
adipose tissue
350
heart
340
epithelium
286
brain
236
vasculature
230
blood vessel
163
kidney
158
bone element
141
artery
122
limb
96
musculature of body
61
blood
61
bodily fluid
61
eye
43
nerve
35
embryo
25
spleen
22
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
62
AMP
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
62
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
month_released!
May, 2021
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
ATAC-seq
cell line
GM12878
60
1
tissue
islet of Langerhans
1
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