Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
Assay category
94
DNA binding
Target of assay
723
histone modification
722
histone
483
transcription factor
372
narrow histone mark
349
broad histone mark
302
control
94
RNA binding protein
89
recombinant protein
35
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
34
November, 2017
21
November, 2018
11
October, 2018
6
August, 2017
6
January, 2019
May, 2021
4
April, 2019
4
December, 2017
4
May, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
93
bam
91
bigWig
90
bed narrowPeak
84
fastq
83
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
tar
Organism
94
Homo sapiens
Biosample type
65
cell line
23
tissue
primary cell
6
in vitro differentiated cells
Organ
58
liver
10
blood
10
bodily fluid
9
connective tissue
9
pancreas
5
adipose tissue
5
heart
3
blood vessel
3
epithelium
3
vasculature
1
artery
1
kidney
Project
94
AMP
Genome assembly (visualization)
90
hg19
86
GRCh38
Lab
93
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
month_released!
May, 2021
biosample_type!
primary cell
BIOSAMPLE
ASSAY
94 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
54
GM12878
10
EndoC_BH1
1
tissue
body of pancreas
5
heart left ventricle
3
omental fat pad
3
islet of Langerhans
2
subcutaneous adipose tissue
2
+ See 8 more…
in vitro differentiated cells
adipocyte
4
hepatocyte
2
See all biosamples
Download