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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
4
Hi-C
2
RRBS
2
total RNA-seq
1
pCHi-C
Assay category
9
DNA binding
4
3D chromatin structure
2
DNA methylation
2
Transcription
Target of assay
6
histone
6
histone modification
4
broad histone mark
3
control
2
narrow histone mark
Date released
11
August, 2017
4
July, 2019
2
February, 2020
1
March, 2020
May, 2022
Available data
bam
3
tsv
2
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
18
Homo sapiens
Biosample type
18
tissue
Organ
205
kidney
176
heart
154
pancreas
99
epithelium
89
bone element
65
connective tissue
50
liver
45
blood vessel
45
vasculature
44
adipose tissue
39
artery
34
brain
26
eye
20
lung
18
musculature of body
8
blood
8
bodily fluid
8
limb
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
18
AMP
Genome assembly (visualization)
hg19
Lab
18
AMP-T2D consortium
month_released!
May, 2022
assembly!
hg19
files.file_type!
bam
BIOSAMPLE
ASSAY
18 results
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table-tab-icon
Clear Filters
ChIP-seq
Hi-C
RRBS
total RNA-seq
pCHi-C
tissue
skeletal muscle tissue
9
2
gastrocnemius medialis
4
1
left ventricle myocardium
1
psoas muscle
1
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