Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
95
ChIP-seq
10
DNase-seq
3
ATAC-seq
2
pCHi-C
Assay category
95
DNA binding
13
DNA accessibility
Transcription
Target of assay
70
histone
70
histone modification
45
broad histone mark
25
control
25
narrow histone mark
Date released
76
November, 2017
10
June, 2019
10
October, 2017
8
October, 2019
3
May, 2019
2
March, 2020
1
July, 2019
Available data
88
bam
75
tagAlign
63
bigWig
62
bed narrowPeak
62
bigBed narrowPeak
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
4
fastq
2
tsv
Organism
110
Homo sapiens
Biosample type
110
tissue
Organ
135
liver
135
pancreas
112
kidney
110
brain
109
heart
89
connective tissue
85
bone element
78
epithelium
63
adipose tissue
62
blood vessel
62
vasculature
44
artery
23
limb
20
musculature of body
14
blood
14
bodily fluid
11
lung
11
nerve
11
spleen
8
embryo
8
eye
5
gonad
5
ovary
5
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
110
AMP
Genome assembly (visualization)
205
GRCh38
hg19
Lab
110
AMP-T2D consortium
Audit category:
1
missing controlled_by
month_released!
May, 2022
assembly!
hg19
assay_slims!
Transcription
BIOSAMPLE
ASSAY
110 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
pCHi-C
tissue
layer of hippocampus
22
caudate nucleus
14
1
substantia nigra
14
cingulate gyrus
12
middle frontal area 46
12
+ See 21 more…
See all biosamples
Download