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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
Assay category
15
DNA binding
Target of assay
120
transcription factor
31
RNA binding protein
27
control
23
histone
23
histone modification
23
recombinant protein
15
chromatin remodeller
12
narrow histone mark
11
broad histone mark
3
nucleotide modification
Date released
November, 2017
7
November, 2018
6
January, 2019
2
December, 2018
Available data
15
bam
15
bed narrowPeak
15
bigBed narrowPeak
15
bigWig
15
fastq
Organism
15
Homo sapiens
Biosample type
15
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
10
blood
10
bodily fluid
5
liver
Project
15
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
May, 2022
November, 2017
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
cell line
GM12878
10
HepG2
5
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