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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
total RNA-seq
25
ATAC-seq
9
ChIP-seq
1
pCHi-C
Assay category
82
Transcription
25
DNA accessibility
9
DNA binding
Target of assay
5
transcription factor
3
control
1
histone
1
histone modification
1
narrow histone mark
Date released
315
November, 2017
96
February, 2021
61
November, 2018
44
August, 2021
30
October, 2019
28
December, 2018
23
January, 2019
21
May, 2021
16
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
100
bam
88
bigWig
82
tsv
15
bed narrowPeak
8
tagAlign
1
bed bed3
1
bed bed3+
Organism
117
Homo sapiens
Biosample type
585
tissue
254
primary cell
158
in vitro differentiated cells
117
cell line
Organ
66
artery
66
blood vessel
66
heart
66
vasculature
47
epithelium
47
pancreas
2
liver
Project
116
AMP
1
T1D
Genome assembly (visualization)
98
hg19
97
GRCh38
Lab
117
AMP-T2D consortium
Audit category:
47
inconsistent ontology term
1
inconsistent replicate
month_released!
May, 2022
BIOSAMPLE
ASSAY
117 results
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total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
8
6
EndoC_BH1
30
16
1
HepG2
1
1
iPSC derived cell line
2
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