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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
4
total RNA-seq
1
GRO-seq
Assay category
22
DNA binding
4
Transcription
Target of assay
12
histone
12
histone modification
8
narrow histone mark
7
control
4
broad histone mark
3
transcription factor
Date released
13
December, 2017
13
February, 2018
1
January, 2018
Available data
36
bam
29
bigWig
27
fastq
14
bed narrowPeak
14
tsv
3
bed bed3+
0
bigBed narrowPeak
Organism
27
Homo sapiens
Biosample type
27
in vitro differentiated cells
Organ
473
pancreas
467
liver
293
epithelium
134
brain
120
connective tissue
104
kidney
94
heart
85
vasculature
84
limb
80
blood vessel
60
blood
60
bodily fluid
49
musculature of body
46
adipose tissue
27
embryo
26
nerve
25
artery
24
spleen
18
ureter
13
vein
6
eye
Project
27
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
1
hg18
Lab
27
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
month_released!
May, 2022
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
18
4
1
Hepatic endoderm
4
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