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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
53
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
66
Transcription
Date released
89
February, 2021
57
August, 2021
May, 2022
4
February, 2023
1
October, 2022
Available data
3077
bam
2850
bigWig
1607
bed narrowPeak
1469
tsv
1193
fastq
1025
bigBed narrowPeak
358
tagAlign
321
bed broadPeak
284
bigBed broadPeak
247
bed bed3+
151
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
19
hic
19
zippedFastqFolder
16
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
150
Homo sapiens
Biosample type
150
tissue
in vitro differentiated cells
1
cell line
Organ
88
bone element
62
kidney
4
skeleton
Project
151
AMP
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
Audit category:
84
inconsistent ontology term
5
audit script error
month_released!
May, 2022
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
151 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
acetabular part of hip bone
1
ilium
1
ischium
1
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cell line
MIN6
1
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