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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RNA microarray
53
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
66
Transcription
Date released
57
August, 2021
May, 2022
5
February, 2021
4
February, 2023
1
October, 2022
Available data
3077
bam
2890
bigWig
1647
bed narrowPeak
1467
tsv
1193
fastq
1025
bigBed narrowPeak
358
tagAlign
321
bed broadPeak
284
bigBed broadPeak
247
bed bed3+
67
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
19
hic
19
zippedFastqFolder
16
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
66
Homo sapiens
Biosample type
66
tissue
in vitro differentiated cells
1
cell line
Organ
62
kidney
4
bone element
4
skeleton
Project
67
AMP
Lab
57
Katalin Susztak, Upenn
10
AMP-T2D consortium
Audit category:
5
audit script error
month_released!
May, 2022
biosample_type!
in vitro differentiated cells
assay_title!
RNA microarray
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
single cell RNA-seq
MPRA
tissue
kidney
49
13
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
cell line
MIN6
1
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