Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
52
single cell RNA-seq
27
snATAC-seq
10
ATAC-seq
Assay category
144
Transcription
37
DNA accessibility
DNA methylation
Date released
May, 2022
76
February, 2023
59
September, 2020
39
February, 2021
7
August, 2020
October, 2022
Available data
163
fastq
19
zippedFastqFolder
10
bigWig
Organism
181
Homo sapiens
Biosample type
181
primary cell
Organ
63
epithelium
63
pancreas
Project
181
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
3859
AMP-T2D consortium
319
Kyle Gaulton, UCSD
181
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
month_released!
May, 2022
October, 2022
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
181 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
primary cell
Langerhans cell
52
27
pancreatic alpha cell
42
7
exocrine cell
39
pancreatic beta cell
11
3
Download