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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
total RNA-seq
9
ChIP-seq
7
WGBS
1
single cell RNA-seq
Assay category
26
Transcription
9
DNA binding
7
DNA methylation
Target of assay
6
control
3
recombinant protein
3
transcription factor
Date released
259
August, 2021
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
25
tsv
17
fastq
16
bam
9
bigWig
7
bed bedMethyl
7
bigBed bedMethyl
2
bed narrowPeak
2
bigBed narrowPeak
1
csv
Organism
42
Homo sapiens
Biosample type
34
tissue
7
cell line
1
primary cell
Organ
12
brain
5
liver
5
pancreas
5
spleen
3
blood
3
blood vessel
3
bodily fluid
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
nerve
1
spinal cord
Project
42
AMP
Genome assembly (visualization)
79
GRCh38
hg19
Lab
42
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
month_released!
May, 2022
assembly!
hg19
BIOSAMPLE
ASSAY
42 results
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total RNA-seq
ChIP-seq
WGBS
single cell RNA-seq
tissue
spleen
3
2
body of pancreas
1
2
pancreas
2
Ammon's horn
1
C1 segment of cervical spinal cord
1
+ See 22 more…
cell line
HepG2
3
1
GM12878
3
primary cell
pancreatic cell
1
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