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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
19
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
19
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
17
October, 2019
3
July, 2019
2
June, 2019
1
May, 2019
Available data
87
bam
79
bigWig
54
tsv
33
bed narrowPeak
19
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
87
Homo sapiens
Biosample type
64
cell line
21
tissue
2
primary cell
Organ
571
connective tissue
571
pancreas
553
liver
424
adipose tissue
263
epithelium
163
heart
140
vasculature
135
blood vessel
114
kidney
87
artery
82
limb
72
brain
70
bone element
61
musculature of body
54
blood
54
bodily fluid
33
eye
23
nerve
22
embryo
18
ureter
12
skeleton
12
spleen
12
vein
2
pericardium
Project
87
AMP
Genome assembly (visualization)
122
GRCh38
87
hg19
Lab
87
AMP-T2D consortium
month_released!
May, 2022
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
87 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
4
8
tissue
tibial artery
14
1
2
coronary artery
1
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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