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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
6
total RNA-seq
1
GRO-seq
Assay category
15
DNA binding
6
Transcription
Target of assay
12
histone
12
histone modification
8
narrow histone mark
control
4
broad histone mark
3
transcription factor
Date released
10
February, 2018
9
December, 2017
2
May, 2021
1
January, 2018
Available data
21
bam
21
bigWig
20
fastq
14
bed narrowPeak
6
tsv
2
bed bed3+
Organism
22
Homo sapiens
Biosample type
22
in vitro differentiated cells
8
cell line
Organ
89
connective tissue
22
embryo
20
epithelium
14
liver
2
pancreas
1
adipose tissue
1
heart
Project
22
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
1
hg18
Lab
22
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
month_released!
May, 2022
target.investigated_as!
control
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
13
4
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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