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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
11
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
20
Transcription
11
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
control
1
RNA binding protein
1
transcription factor
Date released
712
February, 2021
388
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
299
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
September, 2018
66
April, 2019
64
December, 2017
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
26
January, 2019
25
February, 2020
21
February, 2018
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
57
bam
37
bed narrowPeak
31
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
59
Homo sapiens
Biosample type
40
tissue
14
cell line
5
in vitro differentiated cells
Organ
53
pancreas
14
epithelium
1
adipose tissue
1
connective tissue
Project
59
AMP
Genome assembly (visualization)
59
hg19
57
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
month_released!
May, 2022
target.investigated_as!
control
organ_slims!
embryo
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
11
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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