Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
22
DNA binding
9
Transcription
6
3D chromatin structure
6
DNA methylation
2
DNA accessibility
Target of assay
19
histone
19
histone modification
12
broad histone mark
7
narrow histone mark
3
control
Date released
June, 2019
26
August, 2017
10
July, 2019
May, 2019
5
March, 2020
2
February, 2020
2
May, 2022
1
January, 2018
Available data
21
bigWig
15
tagAlign
13
bed broadPeak
13
bed narrowPeak
9
tsv
7
bam
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
bed bed3+
1
txt
Organism
46
Homo sapiens
Biosample type
43
tissue
3
primary cell
Organ
940
pancreas
789
liver
665
connective tissue
499
epithelium
489
adipose tissue
337
heart
254
kidney
228
brain
179
vasculature
175
blood vessel
159
bone element
134
artery
83
limb
69
blood
69
bodily fluid
54
eye
46
musculature of body
43
nerve
37
embryo
25
spleen
22
vein
20
lung
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
46
AMP
Genome assembly (visualization)
26
hg19
7
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
May, 2023
May, 2019
June, 2019
BIOSAMPLE
ASSAY
46 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
total RNA-seq
RRBS
small RNA-seq
ATAC-seq
WGBS
pCHi-C
single cell RNA-seq
snATAC-seq
tissue
skeletal muscle tissue
22
1
4
1
1
1
1
gastrocnemius medialis
4
1
psoas muscle
2
2
1
left ventricle myocardium
1
muscle of leg
1
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
Download