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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
32
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
74
DNA binding
35
Transcription
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
81
bam
60
fastq
52
bigWig
45
bed narrowPeak
45
bigBed narrowPeak
36
tsv
Organism
111
Homo sapiens
Biosample type
102
tissue
7
primary cell
2
in vitro differentiated cells
Organ
54
pancreas
25
adipose tissue
25
connective tissue
12
brain
8
epithelium
6
liver
3
blood vessel
3
heart
3
kidney
3
limb
3
vasculature
2
artery
2
musculature of body
1
eye
1
nerve
1
spinal cord
Project
111
AMP
Genome assembly (visualization)
52
GRCh38
52
hg19
Lab
111
AMP-T2D consortium
Audit category:
4
audit script error
3
inconsistent ontology term
Audit category:
1
inconsistent control read length
month_released!
May, 2023
BIOSAMPLE
ASSAY
111 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
tissue
body of pancreas
33
1
endocrine pancreas
16
subcutaneous adipose tissue
12
1
omental fat pad
11
1
pancreas
2
+ See 25 more…
primary cell
hepatocyte
5
pancreatic acinar cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
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