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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
283
ChIP-seq
5
ATAC-seq
Assay category
283
DNA binding
5
DNA accessibility
Target of assay
238
transcription factor
65
recombinant protein
34
RNA binding protein
24
histone
24
histone modification
18
control
15
chromatin remodeller
14
narrow histone mark
10
broad histone mark
2
other context
2
other post-translational modification
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
May, 2023
Available data
287
bam
286
bigWig
282
fastq
264
bed narrowPeak
263
bigBed narrowPeak
70
bed broadPeak
64
bigBed broadPeak
18
tagAlign
3
tar
2
bed bed3+
Organism
288
Homo sapiens
Biosample type
266
cell line
14
primary cell
8
tissue
Organ
266
liver
15
brain
11
epithelium
7
pancreas
6
vasculature
3
blood vessel
Project
288
AMP
Genome assembly (visualization)
288
hg19
287
GRCh38
Lab
288
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
May, 2023
BIOSAMPLE
ASSAY
288 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
266
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
pancreatic alpha cell
2
pancreatic beta cell
2
+ See 1 more…
tissue
cingulate gyrus
2
islet of Langerhans
2
middle frontal area 46
2
caudate nucleus
1
substantia nigra
1
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