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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
175
ChIP-seq
1
ATAC-seq
1
total RNA-seq
Assay category
175
DNA binding
1
DNA accessibility
1
Transcription
Target of assay
150
histone
150
histone modification
105
narrow histone mark
45
broad histone mark
22
control
3
RNA binding protein
3
transcription factor
Date released
91
November, 2017
86
October, 2019
30
June, 2019
28
May, 2019
18
July, 2019
16
October, 2017
12
February, 2020
2
March, 2020
2
November, 2018
1
February, 2023
Available data
161
bam
142
bigWig
139
bed narrowPeak
104
tagAlign
63
bigBed narrowPeak
12
bed broadPeak
9
fastq
6
bigBed broadPeak
1
tagAlign bed3+
1
tsv
Organism
177
Homo sapiens
Biosample type
168
tissue
9
primary cell
Organ
322
liver
177
brain
69
limb
53
vasculature
50
blood vessel
42
nerve
41
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
177
AMP
Genome assembly (visualization)
141
GRCh38
93
hg19
Lab
177
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
May, 2023
BIOSAMPLE
ASSAY
177 results
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ChIP-seq
ATAC-seq
total RNA-seq
tissue
layer of hippocampus
23
substantia nigra
16
caudate nucleus
15
cingulate gyrus
14
middle frontal area 46
14
+ See 63 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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