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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
47
ATAC-seq
30
DNase-seq
Assay category
166
Transcription
134
DNA binding
77
DNA accessibility
10
DNA methylation
3
3D chromatin structure
Target of assay
97
histone
97
histone modification
57
broad histone mark
40
narrow histone mark
20
control
17
transcription factor
11
RNA binding protein
Date released
57
April, 2019
40
May, 2024
35
February, 2023
35
June, 2019
21
May, 2019
14
February, 2021
5
October, 2019
4
July, 2019
Available data
191
bed narrowPeak
148
bigWig
135
bam
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
6
tagAlign
Organism
211
Homo sapiens
Biosample type
189
tissue
14
cell line
8
primary cell
Organ
391
pancreas
266
liver
246
epithelium
215
kidney
211
heart
187
connective tissue
164
brain
154
vasculature
152
blood vessel
110
limb
83
artery
81
adipose tissue
74
musculature of body
69
blood
69
bodily fluid
38
nerve
37
eye
22
embryo
22
spleen
20
vein
18
ureter
12
bone element
12
skeleton
10
lung
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
Project
211
AMP
Genome assembly (visualization)
190
GRCh38
113
hg19
Lab
171
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
5
inconsistent ontology term
month_released!
November, 2017
BIOSAMPLE
ASSAY
211 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
5
36
2
left cardiac atrium
40
1
heart left ventricle
35
2
3
heart
14
18
heart right ventricle
13
1
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
6
8
primary cell
cardiac fibroblast
5
3
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