Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
33
DNase-seq
1
ATAC-seq
1
snATAC-seq
Assay category
39
DNA binding
35
DNA accessibility
9
Transcription
6
3D chromatin structure
6
DNA methylation
Target of assay
33
histone
33
histone modification
20
broad histone mark
13
narrow histone mark
6
control
Date released
43
June, 2019
22
August, 2017
7
May, 2019
1
January, 2018
1
May, 2022
Available data
61
bigWig
60
bed narrowPeak
50
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
1
txt
Organism
74
Homo sapiens
Biosample type
63
tissue
11
primary cell
Organ
391
pancreas
266
liver
246
epithelium
215
kidney
211
heart
187
connective tissue
164
brain
154
vasculature
152
blood vessel
110
limb
83
artery
81
adipose tissue
74
musculature of body
69
blood
69
bodily fluid
38
nerve
37
eye
22
embryo
22
spleen
20
vein
18
ureter
12
bone element
12
skeleton
10
lung
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
Project
74
AMP
Genome assembly (visualization)
62
hg19
46
GRCh38
Lab
74
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
1
audit script error
month_released!
November, 2017
BIOSAMPLE
ASSAY
74 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
snATAC-seq
tissue
skeletal muscle tissue
22
1
1
muscle of leg
7
13
muscle of arm
17
forelimb muscle
1
hindlimb muscle
1
primary cell
skeletal muscle satellite cell
8
skeletal muscle cell
2
1
Download