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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
Assay category
107
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
43
transcription factor
41
histone
41
histone modification
23
control
21
broad histone mark
20
narrow histone mark
5
RNA binding protein
3
chromatin remodeller
Date released
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
107
bam
94
fastq
83
bed narrowPeak
83
bigWig
50
bigBed narrowPeak
15
bed bed3+
Organism
107
Homo sapiens
Biosample type
48
tissue
43
in vitro differentiated cells
13
cell line
3
stem cell
Organ
63
liver
32
epithelium
13
embryo
13
pancreas
Project
107
AMP
Genome assembly (visualization)
88
GRCh38
88
hg19
Lab
107
AMP-T2D consortium
Audit category:
27
inconsistent control
17
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
month_released!
November, 2017
BIOSAMPLE
ASSAY
107 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
cell line
EndoC_BH1
13
stem cell
hESC
3
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