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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
DNase-seq
22
ChIP-seq
Assay category
195
DNA accessibility
22
DNA binding
Target of assay
22
histone
22
histone modification
14
broad histone mark
8
narrow histone mark
Date released
187
June, 2019
20
August, 2017
9
October, 2019
November, 2017
1
November, 2020
Available data
2992
bam
2835
bigWig
1600
tsv
1496
bed narrowPeak
fastq
730
bigBed narrowPeak
320
tagAlign
273
bed bed3+
252
bed broadPeak
221
bigBed broadPeak
157
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
1
vcf
Organism
217
Homo sapiens
Biosample type
187
tissue
29
primary cell
1
cell line
Organ
78
kidney
46
musculature of body
36
limb
30
brain
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
11
pancreas
8
connective tissue
4
artery
4
eye
4
vein
2
adipose tissue
2
liver
2
nerve
Project
217
AMP
Genome assembly (visualization)
195
GRCh38
194
hg19
Lab
217
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
November, 2017
files.file_type!
fastq
organ_slims!
skeleton
BIOSAMPLE
ASSAY
217 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
skeletal muscle tissue
13
+ See 39 more…
primary cell
endothelial cell of umbilical vein
2
2
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
See all biosamples
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