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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
18
histone
18
histone modification
14
transcription factor
10
narrow histone mark
8
broad histone mark
7
chromatin remodeller
1
RNA binding protein
Date released
November, 2017
16
August, 2017
8
December, 2017
5
November, 2018
2
February, 2018
1
October, 2018
Available data
32
bam
32
bed narrowPeak
32
bigWig
32
fastq
12
bigBed narrowPeak
9
bed bed3+
Organism
32
Homo sapiens
Biosample type
14
in vitro differentiated cells
6
tissue
5
cell line
5
primary cell
2
stem cell
Organ
9
pancreas
6
connective tissue
6
liver
5
epithelium
embryo
Project
32
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
32
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
32
inconsistent control read length
5
inconsistent control run_type
4
inconsistent assembly
month_released!
November, 2017
December, 2019
organ_slims!
embryo
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
primitive gut cell
2
tissue
pancreas
4
body of pancreas
1
liver
1
cell line
HepG2
5
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
stem cell
hESC
2
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