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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
15
total RNA-seq
7
ATAC-seq
Assay category
22
DNA binding
15
Transcription
7
DNA accessibility
Target of assay
22
histone
22
histone modification
13
broad histone mark
9
narrow histone mark
Date released
574
February, 2021
316
May, 2021
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
44
bigWig
44
fastq
43
bam
28
bed narrowPeak
15
tsv
6
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
Organism
44
Homo sapiens
Biosample type
31
in vitro differentiated cells
13
tissue
Organ
10
embryo
6
brain
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
44
AMP
Genome assembly (visualization)
45
GRCh38
44
hg19
Lab
43
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
3
missing controlled_by
Audit category:
2
inconsistent control read length
month_released!
November, 2017
BIOSAMPLE
ASSAY
44 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
6
4
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
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tissue
brain
6
body of pancreas
4
islet of Langerhans
1
omental fat pad
1
spleen
1
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