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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
55
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
68
Transcription
DNA accessibility
Date released
89
February, 2021
57
August, 2021
6
May, 2022
1
October, 2022
Available data
2611
bam
2485
bigWig
1586
tsv
1012
bed narrowPeak
932
fastq
489
bigBed narrowPeak
320
tagAlign
153
txt
93
zippedFastqFolder
64
bed bed3+
44
bed broadPeak
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
15
bigBed broadPeak
8
csv
5
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
152
Homo sapiens
Biosample type
152
tissue
1
cell line
Organ
88
bone element
62
kidney
6
pancreas
skeleton
Project
153
AMP
Lab
90
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
month_released!
November, 2017
organ_slims!
skeleton
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
153 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
cell line
MIN6
1
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