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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
2
DNase-seq
1
ATAC-seq
Assay category
9
DNA binding
3
DNA accessibility
Target of assay
7
histone
7
histone modification
6
broad histone mark
2
control
1
narrow histone mark
Date released
10
October, 2017
November, 2017
2
November, 2018
Available data
165
bam
156
bigWig
139
bed narrowPeak
64
bigBed narrowPeak
52
tagAlign
35
bed bed3+
35
bed broadPeak
32
bigBed broadPeak
26
tsv
12
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
12
Homo sapiens
Biosample type
12
tissue
Organ
471
pancreas
251
epithelium
150
liver
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
12
brain
2
musculature of body
Project
12
AMP
Genome assembly (visualization)
9
GRCh38
8
hg19
Lab
12
AMP-T2D consortium
Audit category:
4
missing controlled_by
month_released!
November, 2017
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
brain
9
2
cerebellum (Hemisphere)
1
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